BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A12LP1|AL426460
(823 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1159 1580 0.0
>3x_Contig1159
Length = 4873
Score = 1580 bits (796), Expect = 0.0
Identities = 811/816 (99%), Gaps = 1/816 (0%)
Strand = Plus / Minus
Query: 1 ccatgagcwggtcaagcatataccgatgccagcgtccatcccaacgtccatcactctcta 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2912 ccatgagctggtcaagcatataccgatgccagcgtccatcccaacgtccatcactctcta 2853
Query: 61 cgagccgcgtttttcagtgcatacaaawgagaaatgggaatttctctttactcgcgcaaa 120
|||||||||||||||||||||| | || | ||||||||||||||||||||||||||||||
Sbjct: 2852 cgagccgcgtttttcagtgcattccaatg-gaaatgggaatttctctttactcgcgcaaa 2794
Query: 121 gggggcgaaaaggcagttttccaaagaaaggaactaaagaaaaaaatctttaattacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2793 gggggcgaaaaggcagttttccaaagaaaggaactaaagaaaaaaatctttaattacaga 2734
Query: 181 aacacagaaaacaaacagacagaaacaacaacaacaataagacaggtgagagacagaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2733 aacacagaaaacaaacagacagaaacaacaacaacaataagacaggtgagagacagaggt 2674
Query: 241 ctgtatacagtgactgctgtgttattgcgagcggcttctgtactggttatttttgtgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673 ctgtatacagtgactgctgtgttattgcgagcggcttctgtactggttatttttgtgttt 2614
Query: 301 gcacagggttagtcaggttgaaaaagatttgagatatagagagagagagagagagagacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2613 gcacagggttagtcaggttgaaaaagatttgagatatagagagagagagagagagagacg 2554
Query: 361 cgcgcgcttgtgagtgttctgtgtgtatccggttttgtgtgcaaaattgagagaacggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2553 cgcgcgcttgtgagtgttctgtgtgtatccggttttgtgtgcaaaattgagagaacggaa 2494
Query: 421 ttataagaggaaacgaataaataaagcagagacaagaagtgcagttgggttgttgaacgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2493 ttataagaggaaacgaataaataaagcagagacaagaagtgcagttgggttgttgaacgt 2434
Query: 481 gacatttaaagttagctgtgtttcgtgagtgtagagtttagtctgttttgttttgtctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2433 gacatttaaagttagctgtgtttcgtgagtgtagagtttagtctgttttgttttgtctct 2374
Query: 541 taacgtttcgaggattaataaactgaattaaacgaacatattaaagaaagtttgagacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2373 taacgtttcgaggattaataaactgaattaaacgaacatattaaagaaagtttgagacag 2314
Query: 601 ggaagagaaaagaaaaaaagaaaattactataactgtaaaaggaagataaatattacaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2313 ggaagagaaaagaaaaaaagaaaattactataactgtaaaaggaagataaatattacaat 2254
Query: 661 acaaggctatggggttatgctgtagttgtttgagaggtgaaagttctctcgaggattcga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2253 acaaggctatggggttatgctgtagttgtttgagaggtgaaagttctctcgaggattcga 2194
Query: 721 cagggttgcccattgcagaaaatgaaagggaagcagtgacgtcgttgttggagtttttag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2193 cagggttgcccattgcagaaaatgaaagggaagcagtgacgtcgttgttggagtttttag 2134
Query: 781 aaaataaggaccaatacgatttctattcggggaaac 816
||||||||||||||||||||||||||||||||||||
Sbjct: 2133 aaaataaggaccaatacgatttctattcggggaaac 2098
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8512
Number of Sequences: 1807
Number of extensions: 8512
Number of successful extensions: 288
Number of sequences better than 1.0e-20: 1
length of query: 823
length of database: 10,358,551
effective HSP length: 16
effective length of query: 807
effective length of database: 10,329,639
effective search space: 8336018673
effective search space used: 8336018673
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)